summed_local_variance: A summed local variance function

Description Usage Arguments Value

View source: R/autoSPIN.r

Description

A summed local variance function

Usage

1
summed_local_variance(expr = NULL, alpha = NULL, data_type = "linear")

Arguments

expr

An expresssion matrix containing n-rows of cells and m-cols of genes.

alpha

A fraction value indicating the size of window for local variance measurement.

data_type

A character string indicating the type of progression, i.e. 'linear' (strictly linear) or 'cyclical' (cyclically linear).

Value

A numeric value of the summed local variance.


uSORT documentation built on Nov. 8, 2020, 5:18 p.m.