Files in uSORT
uSORT: A self-refining ordering pipeline for gene selection

DESCRIPTION
NAMESPACE
R
R/SPIN.r R/Swanderlust.R R/autoSPIN.r R/monocle.R R/uSORT_GUI.R R/uSORT_GeneSelection.R R/uSORT_main.R R/uSORT_postProcess.R R/uSort_preProcess.R R/uSort_sorting_wrapper.R
build
build/vignette.rds
inst
inst/NEWS.Rd
inst/doc
inst/doc/uSORT_quick_start.R inst/doc/uSORT_quick_start.Rmd
inst/doc/uSORT_quick_start.html
inst/extdata
inst/extdata/TPM_test.txt
inst/unitTests
inst/unitTests/test_Rwanderlust.R
man
man/EXP_to_CellDataSet.Rd man/Rwanderlust.Rd man/SPIN.Rd man/STS_sorting.Rd man/STS_sorting_wrapper.Rd man/STS_sortingcost.Rd man/autoSPIN.Rd man/clusterGenes1.Rd man/compareModels1.Rd man/diff_test_helper1.Rd man/differentialGeneTest1.Rd man/distance.function.Rd man/driving_force_gene_selection.Rd man/elbow_detection.Rd man/fluidigmSC_analyzeGeneDetection.Rd man/fluidigmSC_identifyExpOutliers.Rd man/fluidigmSC_isElementIgnoreCase.Rd man/fluidigmSC_readLinearExp.Rd man/fluidigmSC_removeGenesByLinearExpForAllType.Rd man/fluidigmSC_removeGenesByLinearExpForAllType_log2.Rd man/monocle_wrapper.Rd man/neighborhood_sorting.Rd man/neighborhood_sorting_wrapper.Rd man/neighborhood_sortingcost.Rd man/pca_gene_selection.Rd man/sWanderlust.Rd man/scattering_quantification_per_gene.Rd man/sorting_method_parameter_GUI.Rd man/summed_local_variance.Rd man/summed_local_variance_cyclical.Rd man/summed_local_variance_linear.Rd man/trajectory_landmarks.Rd man/uSORT.Rd man/uSORT_GUI.Rd man/uSORT_parameters_GUI.Rd man/uSORT_preProcess.Rd man/uSORT_sorting_wrapper.Rd man/uSORT_write_results.Rd man/variability_per_gene.Rd man/wanderlust_wrapper.Rd
tests
tests/runTests.R
vignettes
vignettes/driver_gene_profile.png
vignettes/preliminary_sort_distance.png
vignettes/preliminary_sorting_cell_type.png
vignettes/refined_sort_distance.png
vignettes/refined_sorting_cell_type.png
vignettes/uSORT_GUI.png
vignettes/uSORT_para_GUI.png
vignettes/uSORT_quick_start.Rmd
vignettes/uSORT_workflow.png
uSORT documentation built on May 31, 2017, 11:39 a.m.