write_jaspar: Export motifs in JASPAR format.
In universalmotif: Import, Modify, and Export Motifs with R

Description Usage Arguments Value Author(s) References See Also Examples

Convert motifs to JASPAR format and write to file. See http://jaspar.genereg.net/.

1	write_jaspar(motifs, file, overwrite = FALSE, append = FALSE)

`motifs`	See `convert_motifs()` for acceptable formats.
`file`	`character(1)` File name.
`overwrite`	`logical(1)` Overwrite existing file.
`append`	`logical(1)` Add to an existing file.

NULL, invisibly.

Benjamin Jean-Marie Tremblay, b2tremblay@uwaterloo.ca

\insertRef

jasparuniversalmotif

read_jaspar()

Other write_motifs: write_homer(), write_matrix(), write_meme(), write_motifs(), write_transfac()

1
2
3

transfac <- read_transfac(system.file("extdata", "transfac.txt",
                                    package = "universalmotif"))
write_jaspar(transfac, tempfile())