write_transfac: Export motifs in TRANSFAC format.

Description Usage Arguments Value Author(s) References See Also Examples

View source: R/write_transfac.R

Description

Convert motifs to TRANSFAC format and write to file.

Usage

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write_transfac(motifs, file, overwrite = FALSE, append = FALSE)

Arguments

motifs

See convert_motifs() for acceptable formats.

file

character(1) File name.

overwrite

logical(1) Overwrite existing file.

append

logical(1) Add to an existing file.

Value

NULL, invisibly.

Author(s)

Benjamin Jean-Marie Tremblay, b2tremblay@uwaterloo.ca

References

\insertRef

transfacuniversalmotif

See Also

read_transfac()

Other write_motifs: write_homer(), write_jaspar(), write_matrix(), write_meme(), write_motifs()

Examples

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jaspar <- read_jaspar(system.file("extdata", "jaspar.txt",
                                    package = "universalmotif"))
write_transfac(jaspar, tempfile())

universalmotif documentation built on April 8, 2021, 6 p.m.