varPartData: Simulation dataset for examples

In variancePartition: Quantify and interpret divers of variation in multilevel gene expression experiments

Description

A simulated dataset of gene expression and metadata

A simulated dataset of gene counts

info about study design

Normalized expression data

Usage

data(varPartData)

data(varPartData)

data(varPartData)

data(varPartData)

Format

A dataset of 100 samples and 200 genes

A dataset of 100 samples and 200 genes

A dataset of 100 samples and 200 genes

A dataset of 100 samples and 200 genes

Details

• geneCounts gene expression in the form of RNA-seq counts

• geneExpr gene expression on a continuous scale

• info metadata about the study design

• geneCounts gene expression in the form of RNA-seq counts

• geneExpr gene expression on a continuous scale

• info metadata about the study design

• geneCounts gene expression in the form of RNA-seq counts

• geneExpr gene expression on a continuous scale

• info metadata about the study design

• geneCounts gene expression in the form of RNA-seq counts

• geneExpr gene expression on a continuous scale

• info metadata about the study design

variancePartition documentation built on Nov. 8, 2020, 5:18 p.m.