eBayes-method: eBayes for MArrayLM2

In variancePartition: Quantify and interpret divers of variation in multilevel gene expression experiments

Description

eBayes for MArrayLM2. It simply returns the orginal input with no change

Usage

## S4 method for signature 'MArrayLM2'
eBayes(
  fit,
  proportion = 0.01,
  stdev.coef.lim = c(0.1, 4),
  trend = FALSE,
  robust = FALSE,
  winsor.tail.p = c(0.05, 0.1)
)

Arguments

fit	fit
proportion	proportion
stdev.coef.lim	stdev.coef.lim
trend	trend
robust	robust
winsor.tail.p	winsor.tail.p

Details

Note that empirical Bayes is problematic for linear mixed models. This function returns its original input with no change. It is included here just for compatibility.

Value

results of eBayes

variancePartition documentation built on Nov. 8, 2020, 5:18 p.m.