View source: R/DAISIE_loglik_integrate.R
DAISIE_loglik_integrand | R Documentation |
Integrand to be integrated to calculate the log likelihood for the relaxed rate model.
DAISIE_loglik_integrand( DAISIE_par, pars1, pars2, brts, stac, missnumspec, methode, abstolint, reltolint, verbose, pick, par_mean, par_sd )
DAISIE_par |
A numeric parameter to evaluate the integral of the function. |
pars1 |
Vector of model parameters: |
pars2 |
Vector of settings: |
brts |
Numeric vector of branching times |
stac |
Numeric of Endemicity status |
missnumspec |
Numeric of missing species |
methode |
Method of the ODE-solver. Supported Boost |
abstolint |
Numeric absolute tolerance of the integration |
reltolint |
Numeric relative tolerance of the integration |
verbose |
In simulation and dataprep functions a logical,
|
pick |
Numeric determining which parameter is selected for the relaxed-rate model |
A numeric
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