summarize_kmer_core: summarize_kmer_core

In DCLEAR: Distance Based Cell Lineage Reconstruction

summarize_kmer_core

Description

Summarize kmer distributions (core function)

Usage

summarize_kmer_core(
  k = 2,
  reps = 20L,
  n_samples = 200L,
  n_nodes = 100L,
  config = NULL
)

Arguments

k	k-mer (default = 2)
reps	number of simulated trees
n_samples	number of samples to simulate
n_nodes	number of nodes to sample (including both leaves and internval nodes)
config	lineage tree configuration (a lineage_tree_config object)

Value

a kmer_summary object

Author(s)

Wuming Gong ([e-mail])

DCLEAR documentation built on Sept. 14, 2023, 9:09 a.m.