API for HTSSIP
High Throughput Sequencing of Stable Isotope Probing Data Analysis

Global functions
BD_shift Man page Source code Source code
DESeq2_l2fc Man page Source code
HRSIP Man page Source code
HTSSIP Man page
HTSSIP-package Man page
HTSSIP_sim Man page Source code
OTU_qPCR_trans Man page Source code
SIP_betaDiv_ord Man page Source code
as.Num Man page Source code
calc_Gi Man page Source code
calc_Mheavymax Man page Source code
calc_atom_excess Man page Source code
data-physeq_S2D1 Man page
data-physeq_S2D1_l Man page
data-physeq_S2D2 Man page
data-physeq_S2D2_l Man page
data-physeq_rep3 Man page
data-physeq_rep3_qPCR Man page
delta_BD Man page Source code
evaluate_matches Man page Source code
expr_param_extract Man page Source code
extract_expressions Man page Source code
extract_formats Man page Source code
filter_l2fc Man page Source code
format_metadata Man page Source code
fraction_overlap Man page Source code
get_treatment_params Man page Source code
gradient_sim Man page Source code
lin_interp Source code
match_brace Man page Source code
match_placeholders Man page Source code
max_BD_range Man page Source code
overlap_wmean_dist Man page Source code
parse_dist Man page Source code
perc_overlap Man page Source code
perm_otu Source code
phyloseq2df Man page Source code
phyloseq2table Man page Source code
phyloseq_list_ord_dfs Man page Source code
phyloseq_ord_plot Man page Source code
phyloseq_subset Man page Source code
physeq_S2D1 Man page
physeq_S2D1_l Man page
physeq_S2D2 Man page
physeq_S2D2_l Man page
physeq_format Man page Source code
physeq_list_betaDiv Man page Source code
physeq_list_ord Man page Source code
physeq_rep3 Man page
physeq_rep3_qPCR Man page
qPCR_sim Man page Source code Source code
qSIP_atom_excess Man page Source code
qSIP_atom_excess_format Man page Source code
qSIP_bootstrap Man page Source code Source code
sample_W Source code
stringterpolate Man page Source code
tss Man page Source code
HTSSIP documentation built on July 25, 2017, 1:01 a.m.