Transform OTU counts based on qPCR data
OTU counts in the phyloseq otu_table object will be normalized
to sample totals (total sum scaling), then multiplied by the
qPCR value associated with each sample. Thus, the qPCR table
should have ONE value matching the OTU count table. Value
matching between the OTU table & qPCR value table to set by
OTU_qPCR_trans(physeq, qPCR, sample_idx = "Sample", value_idx = "qPCR_tech_rep_mean")
A phyloseq object
Either a list or a data.frame of qPCR data.
If a list, the list should include a 'summary' tag as is produced
The qPCR table column index for matching to otu table samples.
The qPCR table column index for qPCR values.
Note: only the 'summa
A phyloseq object with transformed OTU counts
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