Reformat a phyloseq object of qSIP_atom_excess analysis

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Description

Reformat a phyloseq object of qSIP_atom_excess analysis

Usage

1
qSIP_atom_excess_format(physeq, control_expr, treatment_rep)

Arguments

physeq

A phyloseq object

control_expr

An expression for identifying unlabeled control samples in the phyloseq object (eg., "Substrate=='12C-Con'")

treatment_rep

Which column in the phyloseq sample data designates replicate treatments

Value

numeric value: atom fraction excess (A)

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