Files in HTSSIP
High Throughput Sequencing of Stable Isotope Probing Data Analysis
MD5
NEWS.md
LICENSE
DESCRIPTION
README.md
NAMESPACE
inst/CITATION
inst/doc/HTSSIP_intro.html
inst/doc/quant_incorp.html
inst/doc/BD_shifts.html
inst/doc/beta_diversity_ordinations.Rmd
inst/doc/heavy_SIP.R
inst/doc/BD_shifts.Rmd
inst/doc/quant_incorp.Rmd
inst/doc/HTSSIP_intro.Rmd
inst/doc/heavy_SIP.html
inst/doc/qSIP.R
inst/doc/BD_shifts.R
inst/doc/qSIP.Rmd
inst/doc/HTSSIP_intro.R
inst/doc/qSIP.html
inst/doc/HTSSIP_sim.html
inst/doc/beta_diversity_ordinations.R
inst/doc/heavy_SIP.Rmd
inst/doc/HTSSIP_sim.R
inst/doc/MW_HR_SIP.html
inst/doc/beta_diversity_ordinations.html
inst/doc/HTSSIP_sim.Rmd
inst/doc/MW_HR_SIP.R
inst/doc/quant_incorp.R
inst/doc/MW_HR_SIP.Rmd
vignettes/beta_diversity_ordinations.Rmd
vignettes/BD_shifts.Rmd
vignettes/quant_incorp.Rmd
vignettes/HTSSIP_intro.Rmd
vignettes/qSIP.Rmd
vignettes/heavy_SIP.Rmd
vignettes/HTSSIP_sim.Rmd
vignettes/MW_HR_SIP.Rmd
R/heavy_SIP.R
R/qSIP_atom_excess.R
R/HTSSIP.R
R/chk.R
R/HTSSIP_sim.R
R/qPCR.R
R/phyloseq_subset.R
R/DESeq2_l2fc.R
R/Util.R
R/qSIP_trans.R
R/delta_BD.R
R/BD_shift.R
R/stringterpolate.R
R/pkg_data.R
R/HRSIP.R
R/BD_ordinations.R
man/phyloseq2table.Rd
man/extract_formats.Rd
man/SIP_betaDiv_ord.Rd
man/perc_overlap.Rd
man/data-physeq_S2D1_l.Rd
man/match_brace.Rd
man/filter_l2fc.Rd
man/qSIP_atom_excess_format.Rd
man/fraction_overlap.Rd
man/as.Num.Rd
man/calc_Gi.Rd
man/max_BD_range.Rd
man/match_placeholders.Rd
man/HTSSIP_sim.Rd
man/phyloseq_subset.Rd
man/delta_BD.Rd
man/data-physeq_rep3_qPCR.Rd
man/extract_expressions.Rd
man/phyloseq_ord_plot.Rd
man/HRSIP.Rd
man/BD_shift.Rd
man/data-physeq_S2D2.Rd
man/DESeq2_l2fc.Rd
man/gradient_sim.Rd
man/physeq_list_betaDiv.Rd
man/physeq_list_ord.Rd
man/parse_dist.Rd
man/data-physeq_S2D2_l.Rd
man/calc_Mheavymax.Rd
man/overlap_wmean_dist.Rd
man/phyloseq_list_ord_dfs.Rd
man/qSIP_atom_excess.Rd
man/qPCR_sim.Rd
man/physeq_format.Rd
man/expr_param_extract.Rd
man/format_metadata.Rd
man/heavy_SIP.Rd
man/stringterpolate.Rd
man/OTU_qPCR_trans.Rd
man/qSIP_bootstrap.Rd
man/HTSSIP.Rd
man/evaluate_matches.Rd
man/tss.Rd
man/phyloseq2df.Rd
man/data-physeq_rep3.Rd
man/data-physeq_S2D1.Rd
man/calc_atom_excess.Rd
man/get_treatment_params.Rd
build/vignette.rds
tests/testthat.R
tests/testthat/test-stringterpolate.R
tests/testthat/test-HRSIP.R
tests/testthat/test-BD_shift.R
tests/testthat/test-qSIP_atom_excess.R
tests/testthat/test-qPCR.R
tests/testthat/test-delta_BD.R
tests/testthat/test-BD_ordinations.R
tests/testthat/test-DESeq2_l2fc.R
tests/testthat/test-phyloseq_subset.R
tests/testthat/test-heavy_SIP.R
tests/testthat/test-HTSSIP_sim.R
tests/testthat/test-qSIP_trans.R
tests/testthat/test-chk.R
tests/testthat/test-Util.R
data/physeq_S2D1.rda
data/physeq_S2D1_l.rda
data/physeq_rep3.rda
data/physeq_rep3_qPCR.rda
data/physeq_S2D2_l.rda
data/physeq_S2D2.rda
