physeq_list_ord: calculating ordinations from a list of distance matrices
In HTSSIP: High Throughput Sequencing of Stable Isotope Probing Data Analysis

Description Usage Arguments Value Examples

For each dist object in a provided list, the fucntion calculates an ordination with the phyloseq::ordinate function.

1	physeq_list_ord(physeq_l, physeq_l_d, ord_method = "NMDS")

`physeq_l`	A list of phyloseq objects
`physeq_l_d`	A list of dist objects
`ord_method`	See phyloseq::ordinate

List of ordination objects

data(physeq_S2D2_l)
## Not run: 
# make a list of beta diversity distance matrix objects
physeq_S2D2_l_d = physeq_list_betaDiv(physeq_S2D2_l)
# make a list of ordinations
physeq_S2D2_l_d_ord = physeq_list_ord(physeq_S2D2_l, physeq_S2D2_l_d)

## End(Not run)