CanonicalizeID: Determine the mutation types of insertions and deletions.

View source: R/ID_functions.R

CanonicalizeIDR Documentation

Determine the mutation types of insertions and deletions.

Description

Determine the mutation types of insertions and deletions.

Usage

CanonicalizeID(context, ref, alt, pos)

Arguments

context

A vector of ample surrounding sequence on each side the variants

ref

Vector of reference alleles

alt

Vector of alternative alleles

pos

Vector of the positions of the insertions and deletions in context.

Value

A vector of strings that are the canonical representations of the given insertions and deletions.


ICAMS documentation built on June 22, 2024, 6:47 p.m.