CanonicalizeID: Determine the mutation types of insertions and deletions.

In ICAMS: In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')

Description

Determine the mutation types of insertions and deletions.

Usage

CanonicalizeID(context, ref, alt, pos)

Arguments

context	A vector of ample surrounding sequence on each side the variants
ref	Vector of reference alleles
alt	Vector of alternative alleles
pos	Vector of the positions of the insertions and deletions in context.

Value

A vector of strings that are the canonical representations of the given insertions and deletions.

ICAMS documentation built on April 3, 2021, 5:07 p.m.