CheckAndReturnSBSCatalogs: Check and return SBS catalogs
In ICAMS: In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')
Description
Usage
Arguments
Value
View source: R/shiny_related_functions.R
Description
Check and return SBS catalogs
Usage
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CheckAndReturnSBSCatalogs(
catSBS96,
catSBS1536,
catSBS192 = NULL,
discarded.variants,
annotated.vcfs
)
Arguments
catSBS96
An SBS96 catalog.
catSBS1536
An SBS1536 catalog.
catSBS192
An SBS192 catalog.
discarded.variants
A list of discarded variants.
annotated.vcfs
A list of annotated VCFs.
Value
A list of SBS catalogs. Also return the discarded variants and
annotated VCFs if they exit.
ICAMS documentation built on April 3, 2021, 5:07 p.m.
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Description Usage Arguments Value
View source: R/shiny_related_functions.R
Description
Check and return SBS catalogs
Usage
1 2 3 4 5 6 7 | CheckAndReturnSBSCatalogs(
catSBS96,
catSBS1536,
catSBS192 = NULL,
discarded.variants,
annotated.vcfs
)
|
Arguments
catSBS96 |
An SBS96 catalog. |
catSBS1536 |
An SBS1536 catalog. |
catSBS192 |
An SBS192 catalog. |
discarded.variants |
A list of discarded variants. |
annotated.vcfs |
A list of annotated VCFs. |
Value
A list of SBS catalogs. Also return the discarded variants and annotated VCFs if they exit.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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