CreateExomeStrandedRanges: Create exome transcriptionally stranded regions
In ICAMS: In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')
Description
Usage
Arguments
Value
Description
Create exome transcriptionally stranded regions
Usage
1
CreateExomeStrandedRanges(file, trans.ranges)
Arguments
file
Path to a SureSelect BED file which contains unstranded exome
ranges.
trans.ranges
A data.table which contains transcript range and strand
information. Please refer to TranscriptRanges for more
details.
Value
A data table which contains chromosome name, start, end position,
strand information. It is keyed by chrom, start, and
end.
ICAMS documentation built on April 3, 2021, 5:07 p.m.
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Description Usage Arguments Value
Description
Create exome transcriptionally stranded regions
Usage
1 | CreateExomeStrandedRanges(file, trans.ranges)
|
Arguments
file |
Path to a SureSelect BED file which contains unstranded exome ranges. |
trans.ranges |
A data.table which contains transcript range and strand
information. Please refer to |
Value
A data table which contains chromosome name, start, end position, strand information. It is keyed by chrom, start, and end.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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