Files in ICBioMark
Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
LICENSE
R/generate_maf_data.R R/metrics.R R/predict.R R/gen_model.R R/ensembl_gene_lengths.R R/ICBioMark.R R/example_data.R R/nsclc_data.R R/maf_to_tables.R tests/testthat.R tests/testthat/test-metrics.R
tests/testthat/datatest_table.rds
tests/testthat/test-gen_model.R tests/testthat/test-predict.R tests/testthat/test-maf_to_tables.R tests/testthat/test-generate_maf_data.R
data/example_maf_data.rda
data/example_gen_model.rda
data/example_first_pred_tmb.rda
data/ensembl_gene_lengths.rda
data/nsclc_maf.rda
data/nsclc_survival.rda
data/example_tib_tables.rda
data/example_tmb_tables.rda
data/example_tables.rda
data/example_refit_panel.rda
data/example_predictions.rda
data/example_refit_range.rda
man/fit_gen_model_uninteract.Rd man/ensembl_gene_lengths.Rd man/get_K.Rd man/get_p.Rd man/nsclc_survival.Rd man/pred_first_fit.Rd man/get_stats.Rd man/example_tables.Rd man/fit_gen_model_unisamp.Rd man/get_panels_from_fit.Rd man/get_table_from_maf.Rd man/get_auprc.Rd man/get_biomarker_from_maf.Rd man/example_refit_panel.Rd man/ICBioMark.Rd man/example_predictions.Rd man/get_predictions.Rd man/get_biomarker_tables.Rd man/get_gen_estimates.Rd man/generate_maf_data.Rd man/pred_refit_panel.Rd man/example_refit_range.Rd man/get_mutation_tables.Rd man/vis_model_fit.Rd man/example_first_pred_tmb.Rd man/get_r_squared.Rd man/example_gen_model.Rd man/example_tmb_tables.Rd man/example_tib_tables.Rd man/get_mutation_dictionary.Rd man/nsclc_maf.Rd man/pred_intervals.Rd man/pred_refit_range.Rd man/example_maf_data.Rd man/fit_gen_model.Rd
man/figures/README-example_gen_model-1.png
man/figures/README-example_predictions-1.png
ICBioMark documentation built on March 18, 2021, 5:08 p.m.