nsclc_maf: Non-Small Cell Lung Cancer MAF Data
In ICBioMark: Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers
Description
Usage
Format
Source
Description
A pre-loaded mutation dataset from Campbell et. al (2016), downloaded from The Cancer Genome Atlas.
Usage
1
Format
An annotated mutation dataframe with 6 columns and 299855 rows:
- Tumor_Sample_Barcode
A sample id for each mutation.
- Hugo_Symbol
The name of the gene location for each mutation.
- Variant_Classification
The mutation type for each mutation.
- Chromosome
Chromosome on which the mutation occurred.
- Start_Position
Start nucleotide location for mutation.
- End_Position
End nucleotide location for mutation.
Source
https://www.cbioportal.org/study/summary?id=nsclc_tcga_broad_2016
ICBioMark documentation built on Nov. 15, 2021, 5:09 p.m.
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Description Usage Format Source
Description
A pre-loaded mutation dataset from Campbell et. al (2016), downloaded from The Cancer Genome Atlas.
Usage
1 |
Format
An annotated mutation dataframe with 6 columns and 299855 rows:
- Tumor_Sample_Barcode
A sample id for each mutation.
- Hugo_Symbol
The name of the gene location for each mutation.
- Variant_Classification
The mutation type for each mutation.
- Chromosome
Chromosome on which the mutation occurred.
- Start_Position
Start nucleotide location for mutation.
- End_Position
End nucleotide location for mutation.
Source
https://www.cbioportal.org/study/summary?id=nsclc_tcga_broad_2016
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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