View source: R/Data_Functions.R
Can | R Documentation |
Diagnostic tools that look up the slot requirements of each MP and compares to the data available in the Data object.
Can(Data, timelimit = 1, MPs = NA, dev = FALSE, silent = FALSE)
Cant(Data, timelimit = 1, silent = FALSE)
DLMdiag(
Data,
command = c("available", "not available", "needed"),
reps = 5,
timelimit = 1,
funcs1 = NA,
dev = FALSE,
silent = FALSE
)
Needed(Data, timelimit = 1, silent = FALSE)
Data |
A data-limited methods data object (class Data) |
timelimit |
The maximum time (seconds) taken for an MP to undertake 5 reps (this filters out methods that are too slow) |
MPs |
Optional list of MP names |
dev |
Logical. Run in development mode? |
silent |
Logical Display messages? |
command |
What to calculate? Character. Options = c("available", "not available", "needed") |
reps |
The number of replicates for the MP |
funcs1 |
A character vector of the MP names (optional) |
Can()
: Identifies MPs that have the correct data, do not produce errors,
and run within the time limit.
Cant()
: Identifies MPs that don't have sufficient data, lead to errors, or don't run in
time along with a list of their data requirements.
DLMdiag()
: Internal function called by Can
and Cant
Needed()
: Identifies what data are needed to run
the MPs that are currently not able to run given a Data
object
avail Data
CanMPs <- Can(MSEtool::Cobia)
CantMPs <- Cant(MSEtool::Cobia)
Needs <- Needed(MSEtool::Cobia)
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