Files in RAINBOWR
Genome-Wide Association Study with SNP-Set Methods

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
LICENSE
R/RcppExports.R R/functions_for_RGWAS.R R/Rice_geno_score.R R/RGWAS.normal.R R/Rice_haplo_block.R R/RGWAS.multisnp.interaction.R R/RGWAS.normal.interaction.R R/Rice_pheno.R R/RGWAS.multisnp.R R/EMM_functions_cpp.R R/RGWAS.epistasis.R R/other_useful_functions.R R/RGWAS.menu.R R/RGWAS.twostep.epi.R R/SS_gwas.R R/RGWAS.twostep.R R/genetrait.R R/Rice_geno_map.R R/RAINBOWR.R R/Rice_Zhao_etal.R R/examples/EM3.linker.cpp_example.R R/examples/RGWAS.normal_example.R R/examples/RGWAS.multisnp_example.R R/examples/EMM.cpp_example.R R/examples/EM3.general_example.R R/examples/RGWAS.twostep.epi_example.R R/examples/RGWAS.twostep_example.R R/examples/RGWAS.normal.interaction_example.R R/examples/RGWAS.multisnp.interaction_example.R R/examples/EM3.cpp_example.R R/examples/RGWAS.epistasis_example.R
src/RcppExports.cpp
src/EMM_functions.cpp
inst/CITATION
inst/doc/RAINBOWR.Rmd
inst/doc/RAINBOWR.html
inst/doc/RAINBOWR.R
build/vignette.rds
vignettes/RAINBOWR.Rmd
data/datalist
data/Rice_Zhao_etal.rda
man/manhattan2.Rd man/RGWAS.menu.Rd man/RGWAS.twostep.epi.Rd man/score.linker.cpp.Rd man/Rice_pheno.Rd man/genesetmap.Rd man/score.calc.Rd man/score.calc.int.Rd man/EM3.op.Rd man/Rice_haplo_block.Rd man/plotPhyloTree.Rd man/EMM.cpp.Rd man/Rice_geno_map.Rd man/manhattan.Rd man/RGWAS.twostep.Rd man/welcome_to_RGWAS.Rd man/calcGRM.Rd man/EMM1.cpp.Rd man/genetrait.Rd man/CalcThreshold.Rd man/score.calc.LR.Rd man/spectralG.cpp.Rd man/estPhylo.Rd man/adjustGRM.Rd man/is.diag.Rd man/plotHaploNetwork.Rd man/score.calc.epistasis.LR.MC.Rd man/Rice_geno_score.Rd man/RGWAS.normal.interaction.Rd man/qq.Rd man/EMM2.cpp.Rd man/EM3.cpp.Rd man/convertBlockList.Rd man/MAF.cut.Rd man/score.calc.LR.MC.Rd man/score.calc.int.MC.Rd man/parallel.compute.Rd man/score.calc.MC.Rd man/EM3.general.Rd man/See.Rd man/Rice_Zhao_etal.Rd man/score.calc.score.MC.Rd man/RGWAS.multisnp.Rd man/design.Z.Rd man/manhattan3.Rd man/estNetwork.Rd man/RAINBOWR.Rd man/score.calc.epistasis.LR.Rd man/cumsumPos.Rd man/RGWAS.normal.Rd man/make.full.Rd man/score.calc.LR.int.Rd man/score.calc.score.Rd man/SS_gwas.Rd man/score.calc.LR.int.MC.Rd man/EM3.linker.cpp.Rd man/modify.data.Rd man/score.calc.epistasis.score.Rd man/score.calc.epistasis.score.MC.Rd man/RGWAS.epistasis.Rd man/RGWAS.multisnp.interaction.Rd man/score.cpp.Rd man/manhattan.plus.Rd
RAINBOWR documentation built on July 4, 2024, 1:11 a.m.