Files in RPPanalyzer
Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
MD5
NAMESPACE
DESCRIPTION
R/plotHeatmap.R
R/plotMeasurementsQC.R
R/read.slidedescription.R
R/annotate.samples.R
R/plotTimeCourse.R
R/logList.R
R/createColumnIndices.R
R/g.link.R
R/create.ID.col.R
R/remove.arrays.R
R/dataPreproc.R
R/samples.id.R
R/read.sampledescription.R
R/write.Data.R
R/dil.ser.id.R
R/sub.ID.R
R/select.sample.group.R
R/norm.BCA.R
R/sample.median.R
R/correctDilinterc.R
R/rppaList2Heatmap.R
R/curveFitLinear.R
R/plotQC.R
R/plotDilutionSeries.R
R/norm.static.II.R
R/plotqq.R
R/array.id.R
R/slides.id.R
R/curvePredictLinear.R
R/spotbyspot.R
R/calcSdc.R
R/rppaList2ExpressionSet.R
R/calcLinear.R
R/pick.high.conc.R
R/test.correlation.R
R/norm.static.I.R
R/Sips.R
R/normalizeRPPA.R
R/norm.texas.R
R/read.Data.R
R/plotTimeCourseII.R
R/read.gpr.R
R/rppa2boxplot.R
R/correctBG.R
R/protein.con.R
R/calcLogistic.R
R/annotate.arrays.R
R/select.measurements.R
R/averageData.R
R/curvePredictSigmoid.R
R/getErrorModel.R
R/heatmapcolors.R
R/get.Splines.R
R/curveFitSigmoid.R
R/simpleBoxplot.R
inst/doc/RPPanalyzer.pdf
inst/extdata/S2.gpr
inst/extdata/Slide2.gpr
inst/extdata/Slide1.gpr
inst/extdata/FCF_Slide.gpr
inst/extdata/S1.gpr
inst/extdata/Slide3.gpr
inst/extdata/S4.gpr
inst/extdata/slidedescription.txt
inst/extdata/sampledescription.txt
vignettes/papers_RPPanalyzer.bib
vignettes/workflow_RPPanalyzer.gif
vignettes/RPPanalyzer.rnw
vignettes/Figure1.jpg
data/dataII.RData
data/HKdata.RData
data/ser.dil.samples.RData
data/dataIII.RData
data/dataI.RData
data/slidedescription.old.txt.gz
data/sampledescription.old.txt.gz
man/averageData.Rd
man/rppaList2ExpressionSet.Rd
man/plotqq.Rd
man/calcSdc.Rd
man/write.Data.Rd
man/rppa2boxplot.Rd
man/correctDilinterc.Rd
man/calcLinear.Rd
man/simpleBoxplot.Rd
man/sampledescription.txt.Rd
man/read.Data.Rd
man/sampledescription.old.Rd
man/slidedescription.txt.Rd
man/plotTimeCourseII.Rd
man/getErrorModel.Rd
man/S1.gpr.Rd
man/correctBG.Rd
man/pick.high.conc.Rd
man/ser.dil.samples.Rd
man/select.sample.group.Rd
man/dataIII.Rd
man/remove.arrays.Rd
man/curvePredictSigmoid.Rd
man/plotMeasurementsQC.Rd
man/slidedescription.old.Rd
man/normalizeRPPA.Rd
man/plotQC.Rd
man/rppanalyzer-package.Rd
man/dataI.Rd
man/test.correlation.Rd
man/dataPreproc.Rd
man/plotTimeCourse.Rd
man/dataII.Rd
man/sample.median.Rd
man/calcLogistic.Rd
man/rppaList2Heatmap.Rd
man/HKdata.Rd
man/logList.Rd
man/select.measurements.Rd
