rppaList2ExpressionSet: Convert RPPA data into Expression Set
In RPPanalyzer: Reads, Annotates, and Normalizes Reverse Phase Protein Array Data

rppaList2ExpressionSet

R Documentation

Convert RPPA data into Expression Set

Description

Converts a RPPA data list into an Expression Set

Usage

   rppaList2ExpressionSet(x)

Arguments

`x`	List with RPPA data set

Details

This function builds an Expression Set from RPPA data. Due to the design of RPPA experiments, pheno and feature data are inverted compared to DNA/RNA array data sets.

Value

object of class Expressionset

Author(s)

Heiko Mannsperger <h.mannsperger@dkfz.de>

Examples

## Not run: 
	library(RPPanalyzer)
	data(dataI)
   dataI_bgcorr <- correctBG(dataI,method="normexp")
	dataI_median <- sample.median(dataI_bgcorr)
	expr.set <- rppaList2ExpressionSet(dataI_median)
    
## End(Not run)

RPPanalyzer documentation built on Aug. 28, 2023, 5:07 p.m.