| do.olda | R Documentation |
Orthogonal LDA (OLDA) is an extension of classical LDA where the discriminant vectors are orthogonal to each other.
do.olda(
X,
label,
ndim = 2,
preprocess = c("center", "scale", "cscale", "whiten", "decorrelate")
)
X |
an |
label |
a length- |
ndim |
an integer-valued target dimension. |
preprocess |
an additional option for preprocessing the data.
Default is "center". See also |
a named list containing
an (n\times ndim) matrix whose rows are embedded observations.
a list containing information for out-of-sample prediction.
a (p\times ndim) whose columns are basis for projection.
Kisung You
ye_characterization_2005Rdimtools
## use iris data
data(iris)
set.seed(100)
subid = sample(1:150, 50)
X = as.matrix(iris[subid,1:4])
label = as.factor(iris[subid,5])
## compare with LDA
out1 = do.lda(X, label)
out2 = do.olda(X, label)
## visualize
opar <- par(no.readonly=TRUE)
par(mfrow=c(1,2))
plot(out1$Y, pch=19, col=label, main="LDA")
plot(out2$Y, pch=19, col=label, main="Orthogonal LDA")
par(opar)
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