riem.median: Fréchet Median and Variation

In Riemann: Learning with Data on Riemannian Manifolds

Fréchet Median and Variation

Description

Given N observations X_1, X_2, …, X_N \in \mathcal{M}, compute Fréchet median and variation with respect to the geometry by minimizing

\textrm{min}_x ∑_{n=1}^N w_n ρ (x, x_n),\quad x\in\mathcal{M}

where ρ (x, y) is a distance for two points x,y\in\mathcal{M}. If non-uniform weights are given, normalized version of the mean is computed and if weight=NULL, it automatically sets equal weights for all observations.

Usage

riem.median(
  riemobj,
  weight = NULL,
  geometry = c("intrinsic", "extrinsic"),
  ...
)

Arguments

riemobj	a S3 "riemdata" class for N manifold-valued data.
weight	weight of observations; if NULL it assumes equal weights, or a nonnegative length-N vector that sums to 1 should be given.
geometry	(case-insensitive) name of geometry; either geodesic ("intrinsic") or embedded ("extrinsic") geometry.
...	extra parameters including maxiter maximum number of iterations to be run (default:50). eps tolerance level for stopping criterion (default: 1e-5).

Value

a named list containing

median

a median matrix on \mathcal{M}.

variation

sum of (weighted) distances.

Examples

#-------------------------------------------------------------------
#        Example on Sphere : points near (0,1) on S^1 in R^2
#-------------------------------------------------------------------
## GENERATE DATA
ndata = 50
mydat = array(0,c(ndata,2))
for (i in 1:ndata){
  tgt = c(stats::rnorm(1, sd=2), 1)
  mydat[i,] = tgt/sqrt(sum(tgt^2))
}
myriem = wrap.sphere(mydat)

## COMPUTE TWO MEANS
med.int = as.vector(riem.median(myriem, geometry="intrinsic")$median)
med.ext = as.vector(riem.median(myriem, geometry="extrinsic")$median)

## VISUALIZE
opar <- par(no.readonly=TRUE)
plot(mydat[,1], mydat[,2], pch=19, xlim=c(-1.1,1.1), ylim=c(0,1.1),
     main="BLUE-extrinsic vs RED-intrinsic")
arrows(x0=0,y0=0,x1=med.int[1],y1=med.int[2],col="red")
arrows(x0=0,y0=0,x1=med.ext[1],y1=med.ext[2],col="blue")
par(opar)

Riemann documentation built on March 18, 2022, 7:55 p.m.