SuperCell: Simplification of scRNA-Seq Data by Merging Together Similar Cells

Aggregates large single-cell data into metacell dataset by merging together gene expression of very similar cells. 'SuperCell' uses 'velocyto.R' <doi:10.1038/s41586-018-0414-6> <https://github.com/velocyto-team/velocyto.R> for RNA velocity. We also recommend installing 'scater' Bioconductor package <doi:10.18129/B9.bioc.scater> <https://bioconductor.org/packages/release/bioc/html/scater.html>.

Package details

AuthorMariia Bilous [aut], Leonard Herault [cre]
Bioconductor views Software
MaintainerLeonard Herault <leonard.herault@unil.ch>
LicenseGPL-3
Version1.0.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("SuperCell")

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SuperCell documentation built on Oct. 25, 2024, 5:07 p.m.