cell_lines: Cancer cell lines dataset

In SuperCell: Simplification of scRNA-Seq Data by Merging Together Similar Cells

Cancer cell lines dataset

Description

ScRNA-seq data of 5 cancer cell lines from [Tian et al., 2019](https://doi.org/10.1038/s41592-019-0425-8).

Usage

cell_lines

Format

A list with gene expression (i.e., log-normalized counts) (GE), and metadata data (meta):

GE

gene expression (log-normalized counts) matrix

meta

cells metadata (cell line annotation)

Details

Data available at authors' [GitHub](https://github.com/LuyiTian/sc_mixology/blob/master/data/) under file name *sincell_with_class_5cl.Rdata*.

Source

\Sexpr[results=rd]{tools:::Rd_expr_doi("https://doi.org/10.1038/s41592-019-0425-8")}

SuperCell documentation built on Oct. 25, 2024, 5:07 p.m.