metacell2_anndata_2_supercell: Convert Metacells (Metacell-2) to Super-cell like object

In SuperCell: Simplification of scRNA-Seq Data by Merging Together Similar Cells

Convert Metacells (Metacell-2) to Super-cell like object

Description

Convert Metacells (Metacell-2) to Super-cell like object

Usage

metacell2_anndata_2_supercell(adata, obs.sc)

Arguments

adata	anndata object of metacells (the output of collect_metacells())
obs.sc	a dataframe of the single-cell anndata object used to compute metacells (anndata after applying divide_and_conquer_pipeline() function)

Value

a list of super-cell like object (similar to the output of SCimplify)

SuperCell documentation built on Oct. 25, 2024, 5:07 p.m.