API for batchtools
Tools for Computation on Batch Systems

Global functions
Algorithm Man page
ClusterFunctions Man page
Experiment Man page
ExperimentRegistry Man page
Hook Man page
Hooks Man page
Job Man page
JobCollection Man page
JobNames Man page
JoinTables Man page
OSError Source code
Problem Man page
Registry Man page
Rscript Source code
SubmitJobResult Man page
Tags Man page
Worker Man page
addAlgorithm Man page Source code
addExperiments Man page Source code
addJobTags Man page Source code
addProblem Man page Source code
ajoin Man page Source code
allIds Source code
assertRegistry Man page Source code
auto_increment Source code
batchExport Man page Source code
batchMap Man page Source code
batchMapResults Man page Source code
batchMapResultsWrapper Source code
batchReduce Man page Source code
batchReduceWrapper Source code
batchtools Man page
batchtools-deprecated Man page
batchtools-package Man page
binpack Man page Source code
btlapply Man page Source code
btmapply Man page Source code
calculateHash Source code
castIds Source code
catf Source code
cfBrewTemplate Man page Source code
cfHandleUnknownSubmitError Man page Source code
cfKillJob Man page Source code
cfReadBrewTemplate Man page Source code
chintersect Source code
chsetdiff Source code
chunk Man page Source code
chunkIds Man page Source code
clearRegistry Man page Source code
convertId Source code
convertIds Source code
count Source code
createCollection Source code
dir Source code
doJobCollection Man page Source code
doJobCollection.JobCollection Source code
doJobCollection.character Source code
estimateRuntimes Man page Source code
execJob Man page Source code
execJob.Experiment Source code
execJob.Job Source code
execJob.JobCollection Source code
execJob.character Source code
extractLog Source code
file.remove.safely Source code
filter Source code
filterNull Source code
findConfFile Source code
findDone Man page Source code Source code
findErrors Man page Source code Source code
findExperiments Man page Source code
findExpired Man page Source code Source code
findJobs Man page Source code
findNotDone Man page Source code Source code
findNotStarted Man page Source code Source code
findNotSubmitted Man page Source code Source code
findOnSystem Man page Source code Source code
findQueued Man page Source code
findRunning Man page Source code
findStarted Man page Source code Source code
findSubmitted Man page Source code Source code
findTagged Man page Source code
findTemplateFile Source code
findTerminated Source code
flatten Man page Source code
fp Source code
getAlgorithmURI Source code
getBatchIds Source code
getDefaultRegistry Man page Source code
getErrorMessages Man page Source code
getExternalDirs Source code
getJob Source code
getJob.ExperimentCollection Source code
getJob.JobCollection Source code
getJobFiles Source code
getJobNames Man page Source code
getJobPars Man page Source code
getJobPars.ExperimentRegistry Source code
getJobPars.Registry Source code
getJobResources Man page Source code
getJobStatus Man page Source code
getJobTable Man page Source code
getJobTags Man page Source code
getLog Man page Source code
getLogFiles Source code
getProblemCacheDir Source code
getProblemCacheURI Source code
getProblemURI Source code
getResultFiles Source code
getSeed Source code
getSleepFunction Source code
getStatus Man page Source code
getStatusTable Source code
getUsedJobTags Man page Source code
grepLogs Man page Source code
guessBy Source code
ijoin Man page Source code
info Source code
insert Source code
is.error Source code
isLocalHost Source code
killJobs Man page Source code
ljoin Man page Source code
loadRegistry Man page Source code
loadRegistryDependencies Source code
loadResult Man page Source code
lpt Man page Source code
makeClusterFunctions Man page Source code
makeClusterFunctionsDocker Man page Source code
makeClusterFunctionsInteractive Man page Source code
makeClusterFunctionsLSF Man page Source code
makeClusterFunctionsMulticore Man page Source code
makeClusterFunctionsOpenLava Man page Source code
makeClusterFunctionsSGE Man page Source code
makeClusterFunctionsSSH Man page Source code
makeClusterFunctionsSlurm Man page Source code
makeClusterFunctionsSocket Man page Source code
makeClusterFunctionsTORQUE Man page Source code
makeExperimentRegistry Man page Source code
makeJob Man page Source code
makeJob.ExperimentRegistry Source code
makeJob.Registry Source code
makeJobCollection Man page Source code
makeJobCollection.ExperimentRegistry Source code
makeJobCollection.Registry Source code
makeProgressBar Source code
makeRegistry Man page Source code
makeSubmitJobResult Man page Source code
mangle Source code
mergeRegistries Source code
mergedJobs Source code
names2 Source code
noIds Source code
npath Source code
ojoin Man page Source code
onAttach Source code
onLoad Source code
onUnload Source code
print.ClusterFunctions Source code
print.ExperimentRegistry Source code
print.JobCollection Source code
print.Registry Source code
print.RuntimeEstimate Man page Source code
print.Status Source code
print.SubmitJobResult Source code
readLog Source code
readRegistry Source code
reduceResults Man page Source code
reduceResultsDataTable Man page Source code
reduceResultsList Man page Source code Source code
removeAlgorithms Man page Source code
removeExperiments Man page Source code
removeJobTags Man page Source code
removeProblems Man page Source code
removeRegistry Man page Source code
resetJobs Man page Source code
rjoin Man page Source code
rnd_hash Source code
runHook Man page Source code
runHook.JobCollection Source code
runHook.Registry Source code
runOSCommand Man page Source code
saveRegistry Man page Source code
seq_row Source code
setClasses Source code
setDefaultRegistry Man page Source code
setJobNames Man page Source code
setKey Source code
setSystemConf Source code
showLog Man page Source code
sjoin Man page Source code
stopf Source code
stri_trunc Source code
submitJobs Man page Source code
summarizeExperiments Man page Source code
sweepRegistry Man page Source code
sync Source code
syncRegistry Man page Source code
testJob Man page Source code
ujoin Man page Source code
unmangle Source code
unwrap Man page Source code
updateRegistry Source code
ustamp Source code
vcapply Source code
viapply Source code
vlapply Source code
vnapply Source code
waitForFile Source code
waitForFiles Source code
waitForJobs Man page Source code
waitForResults Source code
warningf Source code
writeRDS Source code
batchtools documentation built on Dec. 15, 2017, 5:04 p.m.