API for bcRep
Advanced Analysis of B Cell Receptor Repertoire Data
| Global functions | |
|---|---|
| aaDistribution | Man page |
| aaseqtab | Man page |
| aaseqtab2 | Man page |
| bcRep | Man page |
| bcRep-package | Man page |
| clones | Man page |
| clones.CDR3Length | Man page |
| clones.IDlist | Man page |
| clones.allind | Man page |
| clones.filterFunctionality | Man page |
| clones.filterJunctionFrame | Man page |
| clones.filterSize | Man page |
| clones.giniIndex | Man page |
| clones.ind | Man page |
| clones.shared | Man page |
| clones.shared.summary | Man page |
| combineIMGT | Man page |
| compare.aaDistribution | Man page |
| compare.geneUsage | Man page |
| compare.trueDiversity | Man page |
| dist.PCoA | Man page |
| geneUsage | Man page |
| geneUsage.distance | Man page |
| mutationtab | Man page |
| ntseqtab | Man page |
| plotAADistribution | Man page |
| plotClonesCDR3Length | Man page |
| plotClonesCopyNumber | Man page |
| plotCompareAADistribution | Man page |
| plotCompareGeneUsage | Man page |
| plotCompareTrueDiversity | Man page |
| plotDistPCoA | Man page |
| plotGeneComb | Man page |
| plotGeneUsage | Man page |
| plotSequencesMutationAA | Man page |
| plotSequencesMutationBase | Man page |
| plotTrueDiversity | Man page |
| readIMGT | Man page |
| sequences.distance | Man page |
| sequences.functionality | Man page |
| sequences.geneComb | Man page |
| sequences.getAnyFunctionality | Man page |
| sequences.getAnyJunctionFrame | Man page |
| sequences.getInFrames | Man page |
| sequences.getOutOfFrames | Man page |
| sequences.getProductives | Man page |
| sequences.getUnproductives | Man page |
| sequences.junctionFrame | Man page |
| sequences.mutation | Man page |
| sequences.mutation.AA | Man page |
| sequences.mutation.base | Man page |
| summarytab | Man page |
| trueDiversity | Man page |
| vgenes | Man page |
