Files in bcRep
Advanced Analysis of B Cell Receptor Repertoire Data
MD5
DESCRIPTION
NAMESPACE
inst/NEWS.Rmd
inst/NEWS.pdf
inst/doc/vignette.Rmd
inst/doc/vignette.html
inst/doc/NEWS.pdf
inst/doc/vignette.R
vignettes/vignette.Rmd
R/plotGeneComb.R
R/compare.aaDistribution.R
R/sequences.getOutOfFrames.R
R/sequences.getProductives.R
R/plotGeneUsage.R
R/aaDistribution.R
R/clones.shared.summary.R
R/plotDistPCoA.R
R/combineIMGT.R
R/clones.CDR3Length.R
R/plotClonesCDR3Length.R
R/trueDiversity.R
R/geneUsage.R
R/sequences.mutation.AA.R
R/sequences.geneComb.R
R/geneUsage.distance.R
R/clones.filterSize.R
R/sequences.mutation.R
R/clones.filterFunctionality.R
R/clones.filterJunctionFrame.R
R/plotSequencesMutationBase.R
R/sequences.getInFrames.R
R/sequences.functionality.R
R/clones.giniIndex.R
R/clones.R
R/sequences.getAnyJunctionFrame.R
R/sequences.distance.R
R/plotClonesCopyNumber.R
R/dist.PCoA.R
R/sequences.mutation.base.R
R/plotCompareTrueDiversity.R
R/sequences.getUnproductives.R
R/compare.trueDiversity.R
R/plotAADistribution.R
R/compare.geneUsage.R
R/plotTrueDiversity.R
R/clones.shared.R
R/sequences.getAnyFunctionality.R
R/plotCompareAADistribution.R
R/plotSequencesMutationAA.R
R/clones.IDlist.R
R/sequences.junctionFrame.R
R/readIMGT.R
R/plotCompareGeneUsage.R
man/compare.geneUsage.Rd
man/clones.filterJunctionFrame.Rd
man/vgenes.Rd
man/clones.allind.Rd
man/sequences.getAnyFunctionality.Rd
man/sequences.mutation.base.Rd
man/clones.IDlist.Rd
man/plotClonesCopyNumber.Rd
man/geneUsage.distance.Rd
man/readIMGT.Rd
man/bcRep-package.Rd
man/clones.CDR3Length.Rd
man/mutationtab.Rd
man/clones.filterSize.Rd
man/sequences.junctionFrame.Rd
man/dist.PCoA.Rd
man/compare.aaDistribution.Rd
man/clones.filterFunctionality.Rd
man/sequences.mutation.Rd
man/sequences.getAnyJunctionFrame.Rd
man/aaseqtab2.Rd
man/compare.trueDiversity.Rd
man/sequences.functionality.Rd
man/combineIMGT.Rd
man/geneUsage.Rd
man/aaseqtab.Rd
man/clones.giniIndex.Rd
man/clones.Rd
man/summarytab.Rd
man/sequences.distance.Rd
man/sequences.geneComb.Rd
man/trueDiversity.Rd
man/clones.ind.Rd
man/aaDistribution.Rd
man/ntseqtab.Rd
man/sequences.mutation.AA.Rd
man/clones.shared.Rd
build/vignette.rds
data/ntseqtab.rda
data/clones.ind.rda
data/aaseqtab.rda
data/mutationtab.rda
data/vgenes.rda
data/clones.allind.rda
data/datalist
data/aaseqtab2.rda
data/summarytab.rda
