calculate_attraction: Calculate the attraction of cells to other cells using...
In dynwrap: Representing and Inferring Single-Cell Trajectories

calculate_attraction

R Documentation

Calculate the attraction of cells to other cells using velocity

Calculate the attraction of cells to other cells using velocity

calculate_attraction(
  current,
  projected,
  cells = colnames(projected),
  n_waypoints = 50,
  k = 50
)

`current`	Current expression
`projected`	Projected expression based on RNA velocity
`cells`	Which cells to use
`n_waypoints`	Number of waypoints to use
`k`	K knns

Matrix containing the attraction ([-1, 1]) of each cell to the waypoint cells

dynwrap documentation built on July 26, 2023, 5:15 p.m.

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