Description Arguments Details Value See Also
Correct very low frequency site variants.
mlgtResultObject |
An object of class
|
correctThreshold |
The maximimum Minor Allele Frequency (MAF) at which variants will be corrected. |
You may want to alter some of the sequences if you
believe that sequences at very low frequency (within the
set of sequences from a marker/sample pair) represent
sequencing errors. errorCorrect()
is implemented
as an additional step after running mlgt
,
however, it is recommended to include error correction
within mlgt
using the errorCorrect=TRUE
option. Using alignReport
beforehand may
help you decide whether to do this.
A new mlgtResult
object with errors
'corrected'
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