inspectBlastResults: Plot BLAST statisitics for one marker
In mlgt: Multi-Locus Geno-Typing
Description
Usage
Arguments
Details
Value
See Also
Description
prepareMlgtRun produces several BLAST
tables. It is instructive to plot the BLAST results and
assess the performance of different markers.
Usage
1
inspectBlastResults(blastTable, subject)
Arguments
blastTable
The file of BLAST results.
subject
The name of a single marker
Details
This function is used to plot a series of histograms
based on BLAST statistics.
Value
Plots three histograms based on the BLAST statistics
'Alignment length', 'Bit Score' and 'Percent Identity'
See Also
mlgt documentation built on May 1, 2019, 8:45 p.m.
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Description Usage Arguments Details Value See Also
Description
prepareMlgtRun produces several BLAST
tables. It is instructive to plot the BLAST results and
assess the performance of different markers.
Usage
1 | inspectBlastResults(blastTable, subject)
|
Arguments
blastTable |
The file of BLAST results. |
subject |
The name of a single marker |
Details
This function is used to plot a series of histograms based on BLAST statistics.
Value
Plots three histograms based on the BLAST statistics 'Alignment length', 'Bit Score' and 'Percent Identity'
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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