mlgtDesign: An S4 class that holds information about an mlgt analysis.

Description Details See Also

Description

Returned by prepareMlgtRun. Used as sole input for mlgt

Details

projectName

In which project does this run belong

runName

Which run was this. An identifier for the sequnece run

markers

A list of named sequences.

samples

A vector of sample names

fTags

A vector of named sequence of MIDs used to barcode samples at the 5' end.

rTags

A vector of named sequence of MIDs used to barcode samples at the 3' end.

inputFastaFile

The name of the file containing sequences. Currently only fasta format is supported. It is up to you to pre-filter the sequences.

See Also

prepareMlgtRun, mlgt


mlgt documentation built on May 1, 2019, 8:45 p.m.