filterOutIterations: Remove Iterations that Generated Outlier Results

Description Usage Arguments Value Note Author(s) References Examples

View source: R/filterOutIterations.R

Description

Core function called from within a deconvoluteMutCounts() call

Usage

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filterOutIterations(wall, hall, cnt.errors, cnt.reconstructed, params)

Arguments

wall

numeric matrix combining w results from all iterations

hall

numeric matrix combining h results from all iterations

cnt.errors

numeric matrix combining all residuals from all iterations

cnt.reconstructed

numeric matrix combining fitted values from all iterations

params

object (list) including alll parameters for running the analysis

Value

list including all data required for running the subsequent stability check

Note

Affiliation: Meeks Lab, Department of Urology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611 USA Software: Original MATLAB framework was described here: Cell Rep. 2013 Jan 31;3(1):246-59

Author(s)

Damiano Fantini

References

More info at: http://www.biotechworld.it/bioinf/2017/01/22/mutsignatures/

Examples

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# No examples are provided for this function
message("no examples")

mutSignatures documentation built on May 30, 2017, 1:32 a.m.