projectOldMarkers: Plotting routine which shows where markers from original map...

In pheno2geno: High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains

Description

Plotting routine which shows where markers from original map are located on saturated map.

Usage

  projectOldMarkers(cross,population,map=c("genetic","physical"),
    label=c("positions","names","no"),...)

Arguments

cross	An object of class cross. See read.cross for details.
population	An object of class population. See create.population for details.
map	Which map (from the ones stored in the population$maps) should be used to assigning chromosomes on the created map
label	Should the old markers be labeled in the plot (options: position, name or off).
...	Parameters passed to plot.qtl.

Value

None.

Author(s)

Konrad Zych [e-mail], Danny Arends [e-mail] Maintainer: Konrad Zych [e-mail]

See Also

• plotMapComparison - Plotting routine for comparison of two genetic maps.

• markersCorPlot - Plotting correlation between two maps together with markers placement (comparison of coverage).

Examples

	data(testPopulation)
	data(testCross)
	projectOldMarkers(testCross,testPopulation,map="genetic")

pheno2geno documentation built on May 2, 2019, 6:35 a.m.