reg.scan: Scan a Protein in Search of Regulatory PTM Sites

In ptm: Analyses of Protein Post-Translational Modifications

Scan a Protein in Search of Regulatory PTM Sites

Description

Scans the indicated protein in search of regulatory PTM sites.

Usage

reg.scan(up_id)

Arguments

up_id

a character string corresponding to the UniProt ID.

Value

Returns a dataframe where each row corresponds to a residue, and the columns inform about the regulatory modifications.

Author(s)

Juan Carlos Aledo

References

Hornbeck et al. Nucleic Acids Res. 2019 47:D433-D441, (PMID: 30445427).

See Also

meto.scan(), ac.scan(), me.scan(), ub.scan(), su.scan(), gl.scan(), sni.scan(), ni.scan(), ptm.scan(), p.scan(), dis.scan()

Examples

## Not run: reg.scan('P01009')

ptm documentation built on Aug. 7, 2022, 5:05 p.m.