sni.scan: Scan a Protein in Search of S-nitrosylation Sites

In ptm: Analyses of Protein Post-Translational Modifications

Scan a Protein in Search of S-nitrosylation Sites

Description

Scans the indicated protein in search of S-nitrosylation sites.

Usage

sni.scan(up_id, db = 'all')

Arguments

up_id	a character string corresponding to the UniProt ID.
db	the database where to search. It should be one among 'PSP', 'dbPTM', 'all'.

Value

Returns a dataframe where each row corresponds to a modifiable residue.

Author(s)

Juan Carlos Aledo

References

Huang et al. Nucleic Acids Res. 2019 47:D298-D308, (PMID: 30418626).

See Also

meto.scan(), ac.scan(), me.scan(), ub.scan(), su.scan(), gl.scan(), p.scan(), ni.scan(), ptm.scan(), reg.scan(), dis.scan()

Examples

## Not run: sni.scan('P01009')

ptm documentation built on Aug. 7, 2022, 5:05 p.m.