term.go: Get Core Information About the GO Term

In ptm: Analyses of Protein Post-Translational Modifications

Get Core Information About the GO Term

Description

Gets core information about the GO term of interest.

Usage

term.go(go, children = FALSE)

Arguments

go	GO id.
children	logical, when true GO children terms are returned.

Details

When the argument children is set to TRUE, the output of this function is a list with two elements: the first one is a dataframe with the core information, and the second one is a dataframe containing the children terms.

Value

Returns a dataframe containing core information such as term name and definition, reference, aspect, and whether or not the term is obsolete. If children is set to TRUE, the function returns a list.

Author(s)

Juan Carlos Aledo

References

Rhee et al. (2008) Nature Reviews Genetics 9:509–515.

See Also

search.go(), get.go(), bg.go(), hdfisher.go(), gorilla(), net.go()

Examples

## Not run: term.go('GO:0034599')

ptm documentation built on Aug. 7, 2022, 5:05 p.m.