getRefBase: Annotate a test variant

View source: R/seqminer.R

getRefBaseR Documentation

Annotate a test variant

Description

Annotate a test variant

Usage

getRefBase(reference, chrom, position, len = NULL)

Arguments

reference

path to the reference genome file (.fa file)

chrom

a vector of chromosome names

position

a vector of chromosome positions

len

a vector of length

Value

based extracted from the reference genome


seqminer documentation built on May 29, 2024, 8:50 a.m.