tabix.createIndex.vcf: Create tabix index for bgzipped VCF file
In seqminer: Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R
tabix.createIndex.vcf R Documentation
Create tabix index for bgzipped VCF file
Description
Create tabix index for bgzipped VCF file
Usage
tabix.createIndex.vcf(bgzipVcfFile)
Arguments
bgzipVcfFile
character, input vcf file
See Also
http://zhanxw.com/seqminer/ for online manual and examples
Examples
fileName = system.file("vcf/all.anno.filtered.extract.vcf.gz", package = "seqminer")
tabix.createIndex.vcf(fileName)
seqminer documentation built on Sept. 2, 2023, 9:08 a.m.
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| tabix.createIndex.vcf | R Documentation |
Create tabix index for bgzipped VCF file
Description
Create tabix index for bgzipped VCF file
Usage
tabix.createIndex.vcf(bgzipVcfFile)
Arguments
bgzipVcfFile |
character, input vcf file |
See Also
http://zhanxw.com/seqminer/ for online manual and examples
Examples
fileName = system.file("vcf/all.anno.filtered.extract.vcf.gz", package = "seqminer")
tabix.createIndex.vcf(fileName)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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