plot_map_list: Plot a genetic map - Adapted from MAPpoly

In viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species

Plot a genetic map - Adapted from MAPpoly

Description

This function plots a genetic linkage map(s)

Usage

plot_map_list(viewmap, horiz = TRUE, col = "ggstyle", title = "Linkage group")

Arguments

viewmap	object of class viewmap
horiz	logical. If FALSE, the maps are plotted vertically with the first map to the left. If TRUE (default), the maps are plotted horizontally with the first at the bottom
col	a vector of colors for the bars or bar components (default = 'lightgrey') ggstyle produces maps using the default ggplot color palette
title	a title (string) for the maps (default = 'Linkage group')

Value

A data.frame object containing the name of the markers and their genetic position

Author(s)

Marcelo Mollinari, [e-mail]

Cristiane Taniguti, [e-mail]

References

Mollinari, M., and Garcia, A. A. F. (2019) Linkage analysis and haplotype phasing in experimental autopolyploid populations with high ploidy level using hidden Markov models, _G3: Genes, Genomes, Genetics_. \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1534/g3.119.400378")}

viewpoly documentation built on May 29, 2024, 1:26 a.m.