dist_prob_to_class: Returns the class with the highest probability in a genotype...
In viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species
View source: R/utils_helpers.R
dist_prob_to_class R Documentation
Returns the class with the highest probability in
a genotype probability distribution. Function from MAPpoly.
Description
Returns the class with the highest probability in
a genotype probability distribution. Function from MAPpoly.
Usage
dist_prob_to_class(geno, prob.thres = 0.9)
Arguments
geno
the probabilistic genotypes contained in the object
'mappoly.data'
prob.thres
probability threshold to select the genotype.
Values below this genotype are assumed as missing data
Value
a matrix containing the doses of each genotype and
marker. Markers are disposed in rows and individuals are
disposed in columns. Missing data are represented by NAs
viewpoly documentation built on May 29, 2024, 1:26 a.m.
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View source: R/utils_helpers.R
| dist_prob_to_class | R Documentation |
Returns the class with the highest probability in a genotype probability distribution. Function from MAPpoly.
Description
Returns the class with the highest probability in a genotype probability distribution. Function from MAPpoly.
Usage
dist_prob_to_class(geno, prob.thres = 0.9)
Arguments
geno |
the probabilistic genotypes contained in the object
|
prob.thres |
probability threshold to select the genotype. Values below this genotype are assumed as missing data |
Value
a matrix containing the doses of each genotype and marker. Markers are disposed in rows and individuals are disposed in columns. Missing data are represented by NAs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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