Description Usage Arguments Value
fine_map_plot
Fine mapping plot of GWAS confidence interval
1 2 | fine_map_plot(df, plot_trait, strain_comparison = "CB4856", color1 = "blue",
color2 = "orange")
|
df |
is a dataframe that is output by |
plot_trait |
is a character vector corresponding to the trait of interest. |
strain_comparison |
is a character vector corresponding to which strain genotype to use to color points by. Default is CB4856, which will color all variants that CB4856 contains a different color |
color1 |
is a character vector corresponding to the color of the ALT genotype points. Default is blue |
color2 |
is a character vector corresponding to the color of the REF genotype points. Default is orange |
returns a ggplot2 object
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