generate_kinship: Generate Kinship
In AndersenLab/cegwas: A set of functions to process phenotype data, perform GWAS, and perform post-mapping data processing for C. elegans.
Description
Usage
Arguments
Value
See Also
Description
generate_kinship uses vcf_to_matrix and the A.mat function from rrBLUP.
This function is used to generate a kinship matrix for mapping in conjunction with gwas_mappings.
Usage
1
generate_kinship(vcf, region = NA)
Arguments
a
vcf file.
Value
A kinship matrix.
See Also
vcf_to_matrix generate_kinship
AndersenLab/cegwas documentation built on March 6, 2020, 1:10 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also
Description
generate_kinship uses vcf_to_matrix and the A.mat function from rrBLUP.
This function is used to generate a kinship matrix for mapping in conjunction with gwas_mappings.
Usage
1 | generate_kinship(vcf, region = NA)
|
Arguments
a |
vcf file. |
Value
A kinship matrix.
See Also
vcf_to_matrix generate_kinship
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.