gene_variants: Plot variants for gene
In AndersenLab/cegwas: A set of functions to process phenotype data, perform GWAS, and perform post-mapping data processing for C. elegans.
Description
Usage
Arguments
Value
Examples
Description
gene_variants generates a plot to visualize presence of variants for a particular gene of interest
Usage
1
gene_variants(gene)
Arguments
gene
is the gene of interest in gene name (e.g. "top-2", "pot-2") or wormbase gene ID (e.g. "WBGene00010785") format.
Value
Ouput is a list of ggplot objects with strains on the Y axis and variants for gene of interest on X axis. Tiles are colored by variant or reference call.
Examples
1
2
3
gene_variants(gene = c("top-2","pot-2"))
test[[1]]
test[[2]]
AndersenLab/cegwas documentation built on March 6, 2020, 1:10 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
gene_variants generates a plot to visualize presence of variants for a particular gene of interest
Usage
1 | gene_variants(gene)
|
Arguments
gene |
is the gene of interest in gene name (e.g. "top-2", "pot-2") or wormbase gene ID (e.g. "WBGene00010785") format. |
Value
Ouput is a list of ggplot objects with strains on the Y axis and variants for gene of interest on X axis. Tiles are colored by variant or reference call.
Examples
1 2 3 | gene_variants(gene = c("top-2","pot-2"))
test[[1]]
test[[2]]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.