identify_CI: Identify confidence intervals associated with QTL.

Description Usage Arguments Details Value

View source: R/process_mappings.R

Description

identify_CI Identifies confidence intervals for identified QTL

Usage

1
identify_CI(processed_mapping_df, peak_df, peak_list, correlation_df)

Arguments

processed_mapping_df

The first element of the calculate_VE function output

peak_df

The first element of the find_peaks function output

peak_list

The second element of the find_peaks function output

correlation_df

The second element of the calculate_VE function output

Details

Function to combine all of the previously generated data into one data frame. Converts SNP index confidence intervals into genomic position confidence intervals.

Value

Outputs processed mapping dataframe that contains original mapping dataframe with appended information for significant SNPs only, including: variance explained, confidence interval information, genotype information


AndersenLab/cegwas documentation built on March 6, 2020, 1:10 a.m.