Position_site_plot: Draw a rectangle to reflect the specific site of each family.

In Busydog1990/genepro: CProtMEDIAS: clustering of amino acid sequences encoded by gene families by MErging and DIgitizing Aligned Sequences

Draw a rectangle to reflect the specific site of each family.

Description

Draw a rectangle to reflect the specific site of each family.

Usage

Position_site_plot(
  dat,
  site = "gene",
  cluster = "cluster",
  seurat,
  site_color,
  legend = T,
  plot_margin = margin(5, 5, 50, 5)
)

Arguments

dat	Data frame. Specific site data.
site	Character. Site column in dat. Default:"gene".
cluster	Character. Cluster column in dat. Default:"cluster".
seurat	Seurat object.
site_color	Character. Color of each group.
legend	Logical. If TRUE, add a legend to the picture. Default:TRUE.
plot_margin	margin around entire plot (unit with the sizes of the top, right, bottom, and left margins).Default:margin(5,5,50,5)

Value

A ggplot of a rectangle to reflect the specific site of each family.

Busydog1990/genepro documentation built on July 20, 2023, 6:03 a.m.