site_score: Calculate the match score between two sites.
In Busydog1990/genepro: CProtMEDIAS: clustering of amino acid sequences encoded by gene families by MErging and DIgitizing Aligned Sequences
View source: R/Seurat_monocle_workflow.R
site_score R Documentation
Calculate the match score between two sites.
Description
Calculate the match score between two sites.
Usage
site_score(site1, site2, substitutionMatrix, quickly = F)
Arguments
site1
score of site1.
site2
score of site2.
substitutionMatrix
Substitution matrix representing the fixed substitution scores for an alignment.
quickly
If TRUE, only keep the score of AA_STANDARD/DNA_BASES/RNA_BASES for protein/DNA/RNA sequences. Default:TRUE.
Value
Combined multiple alignment results.
Busydog1990/genepro documentation built on July 20, 2023, 6:03 a.m.
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View source: R/Seurat_monocle_workflow.R
| site_score | R Documentation |
Calculate the match score between two sites.
Description
Calculate the match score between two sites.
Usage
site_score(site1, site2, substitutionMatrix, quickly = F)
Arguments
site1 |
score of site1. |
site2 |
score of site2. |
substitutionMatrix |
Substitution matrix representing the fixed substitution scores for an alignment. |
quickly |
If TRUE, only keep the score of AA_STANDARD/DNA_BASES/RNA_BASES for protein/DNA/RNA sequences. Default:TRUE. |
Value
Combined multiple alignment results.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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