read_infiles: Extract sequence:protein ID mappings

View source: R/combine_runs.R

read_infilesR Documentation

Extract sequence:protein ID mappings

Description

Given a list of infiles, read the files, retain the sequence and protein ID columns and bind the rows

Usage

read_infiles(infiles, seq_col, prot_col, master_prot_col)

Arguments

infiles

list. Outfiles from PD

seq_col

string Column name for peptide sequence

prot_col

string Column name for protein(s)

master_prot_col

string Column name for master protein(s)

Value

Returns an data.frame object which maps peptide sequences to protein and master protein ID(s) for each infile


CambridgeCentreForProteomics/camprotR documentation built on July 7, 2024, 2:13 a.m.